Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015806572.1_cds_XP_016494404.1_8816
CDS Infomation

[gene=LOC107813637] [db_xref=GeneID:107813637] [protein=DEAD-box ATP-dependent RNA helicase 56-like isoform X1] [protein_id=XP_016494404.1] [location=join(102519..102634,103140..103240,106506..106678,106782..107013,107146..107264,107734..107790,107875..108059,108589..108733,108828..108911,108996..109059,109143..109153)] [gbkey=CDS]
Sequence

ATGGGAGAGAACAAGGAGAACGATGCTTACGAGGAAGAGCTTCTCGACTACGAAGAAGAT
GATGAGAAGGCCCCCGATTTAGTCAACGGAAAAGTTAACGGCGAGTCCGCCAAGAAGGGT
TATGTTGGAATTCACAGCTCCGGATTCAGAGACTTTCTTTTAAAGCCAGAGCTACTGAGG
GCTATTGTGGATTCAGGGTTTGAGCATCCCTCTGAAGTGCAACATGAGTGTATTCCACAA
GCTATTCTGGGTATGGATGTTATTTGTCAAGCCAAATCTGGAATGGGCAAAACGGCTGTT
TTTGTTCTTTCGACTCTGCAACAAGTTGAACCTGTTGCTGGTCAGGTTGCTGCCTTGGTT
CTATGTCATACAAGGGAATTAGCTTATCAGATCTGTCATGAATTCGAACGGTTCAGCACA
TATTTGCCCGATATCAAGGTTGCTGTTTTCTATGGTGGTGTAAACATCAAACTTCACAAG
GAGCTTCTGAAGAATGAATGCCCTCACATTGTTGTTGGAACTCCTGGGAGAGTACTTTCA
TTGGCTAGAGATAAGGACCTATCTCTGAGGAATGTGAGGCATTTTGTTCTGGATGAATGC
GATAAGATGCTTGAATCACTTGACATGAGGAGAGATGTGCAGGAAATTTTCAAGATGACT
CCCCATGACAAGCAAGTAATGATGTTTTCAGCAACACTCAGCAAGGAGATCCGCCCAGTT
TGCAAAAAATTTATGCAAGATCCTATGGAAATTTATGTTGACGATGAGGCCAAGTTGACC
CTTCATGGACTTGTACAGCACTACATTAAATTGAGCGAAACCGAGAAAAACCGGAAACTA
AATGATCTGCTGGACGCCTTGGACTTCAACCAAGTTGTTATATTTGTCAAGAGTGTAAGT
AGGGCTGCACAGCTGGATAAATTACTAGTGGAGTGTAATTTTCCATCTATCTGCATCCAC
TCTGGCATGACTCAGGAAGAAAGATTGACTCGCTACAAGGGTTTCAAGGAGGGTCACAAG
AGAATTCTCGTCGCAACTGATCTGGTTGGTAGGGGCATTGACATCGAAAGGGTCAACATT
GTTATTAACTATGACATGCCGGATTCTGCAGACACTTATCTTCACAGAGTGGGTAGAGCT
GGTAGGTTTGGAACTAAAGGCCTTGCCATCACATTTGTGTCTTCTGCATCAGATTCTGAT
GTTCTAAATCAGGTTCAAGAAAGGTTTGAAGTAGACATAAAAGAGCTTCCTGAGCAGATT
GATACTTCTACATACATGCCATCTTAG

Peptide Sequence

PEP ID

XP_016494404.1
PEP Infomation

PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like isoform X1 [Nicotiana tabacum]
Sequence

MGENKENDAYEEELLDYEEDDEKAPDLVNGKVNGESAKKGYVGIHSSGFRDFLLKPELLR
AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQVEPVAGQVAALV
LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKLHKELLKNECPHIVVGTPGRVLS
LARDKDLSLRNVRHFVLDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSETEKNRKLNDLLDALDFNQVVIFVKSVS
RAAQLDKLLVECNFPSICIHSGMTQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI
DTSTYMPS

Transcript Sequence

Gene sequence data has not been registered.